Preview

Medical Parasitology and Parasitic Diseases

Advanced search
Open Access Open Access  Restricted Access Subscription Access

Mass spectrometric database for identification of dirofilariae

https://doi.org/10.33092/0025-8326mp2023.4.11-15

EDN: AWADNI

Abstract

The results of using MS MALDI-TOF for diagnosing helminths are modest, but recent studies show the promise of this method for reliable identification of nematodes. The article provides information on compiling a database of dirofilaria (Dirofilaria immitis, Dirofilaria repens).
The protein spectra obtained from 58 D. repens and 118 D. immitis specimens were analyzed using a software mass spectrometer Bruker Daltonics Germany. Adult D. repens specimens and their fragments were obtained from 52 patients of medical organizations in the Rostov region and the South of Russia and from 6 dogs from veterinary clinics in the Rostov region. Adult D. immitis were removed from the heart and large pulmonary vessels of 11 animals of the canine family. The obtained numerical values determine the number of reference spectra and, on their basis, create databases for the identification of the nematode of the genus Dirofilaria. Type and version of the database management system: Bruker Daltonics Biotyper. Database size 562 KB (0,562 MB): D. repens - 145 KB, D. immitis - 417 KB. Based on the data obtained a certificate of registration.

About the Authors

I. S. Berezinskaya
Rostov Research Institute of Microbiology and Parasitology Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being
Russian Federation

Rostov-on-Don



S. A. Nagorny
Rostov Research Institute of Microbiology and Parasitology Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being
Russian Federation

Rostov-on-Don



A. V. Aleshukina
Rostov Research Institute of Microbiology and Parasitology Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being
Russian Federation

Rostov-on-Don



L. A. Ermakova
Rostov Research Institute of Microbiology and Parasitology Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being
Russian Federation

Rostov-on-Don



N. V. Chebyshev
FSAE Institution of Higher Education I.M. Sechenov First Moscow State Medical University of the Ministry of Health of Russian Federation
Russian Federation


I. B. Martyusheva
Rostov Research Institute of Microbiology and Parasitology Russian Federal Service for Supervision of Consumer Rights Protection and Human Well-Being
Russian Federation

Rostov-on-Don



References

1. Sy I., Conrad L., Becker S. L. Recent advances and potential future applications of MALDI-TOF mass spectrometry for identification of helminths // Diagnostics. 2022; 12 (12): 3035. DOI: 10.3390/diagnostics12123035.

2. Feucherolles M., Poppert S., Utzinger J., Becker S.L.. MALDI-TOF mass spectrometry as a diagnostic tool in human and veterinary helminthology: a systematic review // Parasites Vectors. 2019; 12: 245. DOI: 10.1186/s13071019-3493-9.

3. Ермакова Л.А., Нагорный С.А., Пшеничная Н.Ю., Криворотова Е.Ю. Клинические и лабораторные аспекты инвазии человека Dirofilaria repens // Инфекционные болезни. 2018; 16(1): 51-57. [Ermakova L.A., Nagorny S.A., Pshenichnaya N.Yu., Krivorotova E.Yu. Clinical and laboratory aspects of the invasion of human Dirofilaria repens // Infectious diseases. 2018; 16(1): 51-57 (in Russian)]. DOI: 10.20953/1729-9225-2018-1-51-57.

4. Бронштейн, А.М., Малышев, Н.А., Федянина, Л.В., Фролова, А.А., Давыдова, И.В. Клинические маски дирофиляриоза легких и плевры: анализ собственных наблюдений и обзор литературы // Эпидемиология и инфекционные болезни. 2015; 20 (1): 43-49. [Bronshtein, A.M., Malyshev, N.A., Fedyanina, L.V., Frolova, A.A., Davydova, I.V. Clinical masks of pleuropulmonary dirofilariasis, a rare clinical presentation of dirofilariasis in Russia: a report of four cases and literature review // Epidemiology and Infectious Diseases. 2015; 20 (1): 43-49 (in Russian)].

5. Алешукина А.В., Алешукина И.С., Ермакова Л.А., Нагорный С.А., Пшеничная Н.Ю., Криворотова Е.Ю. Способ подготовки проб материала для идентификации вида нематод методом MALDI TOFF Biotyper. Пат. № 2703280 C1 РФ. 2019. [Aleshukina A.V., Aleshukina I.S., Ermakova L.A., Nagornyj S.A., Pshenichnaya N.Yu., Krivorotova E.Yu. Method of preparing material samples for identification of nematode species using the MALDI TOFF Biotyper method. Pat. No. 2703280 C1 RF. 2019. (in Russian)].

6. Нагорный С.А., Алешукина А.В., Алешукина И.С., Денисенко В.В., Ермакова Л.А. Актуальность применения пакета программной среды R-MALDIquant для преобразования необработанных массспектров дирофилярий // Медицинская паразитология и паразитарные болезни. 2022; 4: 16-22. [Nagornyj S.A., Aleshukina A.V., Aleshukina I.S., Denisenko V.V., Ermakova L.A. The relevance of using the Software Package R-MALDIquant for the conversion of raw MassSpectra of Dirofilaria. Med parazitol Mosk, 2022; 4: 16-22 (in Russian)]. DOI: 10.33092/0025-8326mp2022.4.16-22.

7. Чеботарь И.В., Поликарпова С.В., Бочарова Ю.А., Маянский Н.А. Использование времяпролетной масс-спектрометрии с матрично-активированной лазерной десорбцией/ионизацией (MALDI-TОF MS) для идентификации бактериальных и грибковых возбудителей III-IV групп патогенности //Лабораторная служба. 2018; 7(2): 78-86. [Chebotar I.V., Polikarpova S.V., Bocharova Yu.A., Mayansky N.A. Use of matrixassisted laser desorption/ionization time-offlight mass spectrometry (MALDI-TOF MS) for identification of bacteria and fungi of the pathogenicity group III and IV // Laboratornaya sluzhba. 2018; 7(2): 78-86 (in Russian)]. DOI: 10.17116/labs20187278-86.

8. Поликарпова С. В. и др. Руководство по микробиологической диагностике инфекций дыхательных путей у пациентов с муковисцидозом // Тверь: Триада. 2019: Т. 127. [Polikarpova S.V. et al. Guidelines for microbiological diagnosis of respiratory tract infections in patients with cystic fibrosis // Tver: Triad. 2019: T. 127 (in Russian)].

9. Телесманич Н.Р., Гончаренко Е.В., Чайка С.О., Чайка И.А., Теличева В.О. Возможности применения MALDI-TOF масс-спекрометрии для изучения углевод-специфических рецепторов диагностического бактериофага Эль-Тор // Журнал микробиологии, эпидемиологии и иммунобиологии. 2016; 2: 85-90. [Telesmanich N.R., Goncharenko E.V., Chaika S.O., Chaika I.A., Telicheva V.O. Possibilities of application of MALDI-TOF Mass-spectrometry for study of carbohydratespecific receptors for diagnostic bacteriophage El-Tor //Journal of microbiology, epidemiology and immunobiology. 2016; 2: 85-90 (in Russian)].

10. Freiwald A., Sauer S. Phylogenetic classification and identification of bacteria by mass spectrometry // Nature protocols. 2009; 4(5): 732-742. DOI:10.1038/nprot.2009.37.

11. Nagorny S., Aleshukina A., Aleshukina I., Denisenko V., Ermakova L., Pshenichnaya N. Application of Mathematical Models for MALDITOF MS on the Example of Dirofilariasis // International Journal of Infectious Diseases. 2022; 116: S95. DOI: 10.1016/j.ijid.2021.12.224.

12. Березинская И.С., Нагорный С.А., Мартюшева И.Б., Алешукина А.В. База данных масс-спектров нематод (дирофилярий) Свидетельство о регистрации базы данных 2023621061, 31.03.2023. Заявка № 2023620833 от 28.03.2023 [Berezinskaya I.S., Nagorny S.A., Martyusheva I.B., Aleshukina A.V. Database of mass spectra of nematodes (dirofilaria) Database registration certificate 2023621061, 03/31/2023. Application No. 2023620833 dated 03/28/2023. (in Russian)].


Review

For citations:


Berezinskaya I.S., Nagorny S.A., Aleshukina A.V., Ermakova L.A., Chebyshev N.V., Martyusheva I.B. Mass spectrometric database for identification of dirofilariae. Medical Parasitology and Parasitic Diseases. 2023;(4):11-15. (In Russ.) https://doi.org/10.33092/0025-8326mp2023.4.11-15. EDN: AWADNI

Views: 25

JATS XML

ISSN 0025-8326 (Print)
ISSN 2713-1777 (Online)